Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 SPDYE19P-201ENST00000338590 713 ntBASIC16.46■□□□□ 0.23
PGBD3Q8N328 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 AC087499.6-201ENST00000411576 835 ntBASIC16.46■□□□□ 0.23
PGBD3Q8N328 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 API5-211ENST00000534695 560 ntTSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 AC105020.1-201ENST00000435356 2205 ntBASIC16.46■□□□□ 0.23
PGBD3Q8N328 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PGBD3Q8N328 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PGBD3Q8N328 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PGBD3Q8N328 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PGBD3Q8N328 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PGBD3Q8N328 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PGBD3Q8N328 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PGBD3Q8N328 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AC098614.1-201ENST00000368528 745 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AL080243.2-201ENST00000418783 582 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 ATP5G2P4-201ENST00000442175 420 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SERBP1P3-201ENST00000459980 809 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AC026979.3-201ENST00000607315 403 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.45■□□□□ 0.22
PGBD3Q8N328 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PGBD3Q8N328 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.45■□□□□ 0.22
PGBD3Q8N328 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PGBD3Q8N328 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PGBD3Q8N328 BTBD7P1-201ENST00000447253 1453 ntBASIC16.44■□□□□ 0.22
PGBD3Q8N328 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms