Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB43Q86YS6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RAB43Q86YS6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 MIR346-201ENST00000362234 95 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC105233.2-201ENST00000523697 349 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC069120.2-201ENST00000524091 540 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 AF228730.5-201ENST00000530288 346 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 MIR4492-201ENST00000581627 80 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 AL390955.2-201ENST00000603032 514 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 AC008677.1-201ENST00000519230 1561 ntBASIC15.56■□□□□ 0.08
RAB43Q86YS6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB43Q86YS6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB43Q86YS6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms