Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 PCGF3-213ENST00000620529 1899 ntBASIC13.56□□□□□ -0.24
ZNF546Q86UE3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF546Q86UE3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 AC117489.1-201ENST00000625169 3217 ntBASIC13.55□□□□□ -0.24
ZNF546Q86UE3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 AL138966.2-201ENST00000621997 464 ntBASIC13.55□□□□□ -0.24
ZNF546Q86UE3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 AL137784.3-201ENST00000623858 2288 ntBASIC13.55□□□□□ -0.24
ZNF546Q86UE3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF546Q86UE3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AC091951.1-201ENST00000512854 2465 ntBASIC13.54□□□□□ -0.24
ZNF546Q86UE3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms