Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AL353705.2-201ENST00000428243 662 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 KLF2P3-201ENST00000451977 1087 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 CYMP-203ENST00000474680 1263 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AC027796.2-201ENST00000575326 344 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 MIR4453-201ENST00000584019 89 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 MIR4321-201ENST00000592276 80 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AC106028.4-201ENST00000614509 607 ntBASIC15.56■□□□□ 0.08
RNF44Q7L0R7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF44Q7L0R7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 AC125807.1-201ENST00000483097 614 ntBASIC15.55■□□□□ 0.08
RNF44Q7L0R7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF44Q7L0R7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms