Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 RPS8P6-201ENST00000426177 609 ntBASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 RNA5SP410-201ENST00000516285 106 ntBASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC006538.3-201ENST00000612495 578 ntBASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 AC009093.7-201ENST00000623853 1223 ntBASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC144NLQ6NUI1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AC126755.1-201ENST00000525846 6405 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AC006449.6-201ENST00000612330 2296 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SPDYE7P-202ENST00000420373 878 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SLC25A39P2-201ENST00000537614 270 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AC026979.3-201ENST00000607315 403 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 MTHFR-217ENST00000641820 1569 ntBASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms