Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB3Q15768 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB3Q15768 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 MIR661-201ENST00000384842 89 ntBASIC13.81□□□□□ -0.2
EFNB3Q15768 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 COX20P2-201ENST00000452636 358 ntBASIC13.81□□□□□ -0.2
EFNB3Q15768 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 RN7SL618P-201ENST00000477850 296 ntBASIC13.81□□□□□ -0.2
EFNB3Q15768 AC190387.1-201ENST00000551683 408 ntBASIC13.81□□□□□ -0.2
EFNB3Q15768 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.81□□□□□ -0.2
EFNB3Q15768 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB3Q15768 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB3Q15768 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
EFNB3Q15768 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
EFNB3Q15768 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB3Q15768 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB3Q15768 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 BTBD7P1-201ENST00000447253 1453 ntBASIC13.8□□□□□ -0.2
EFNB3Q15768 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
EFNB3Q15768 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB3Q15768 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNB3Q15768 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.8□□□□□ -0.2
EFNB3Q15768 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB3Q15768 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNB3Q15768 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNB3Q15768 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB3Q15768 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms