Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 AL645728.1-201ENST00000366221 2101 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 AC092850.2-201ENST00000623821 2697 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 AL391256.1-201ENST00000443260 1855 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NKX6-1P78426 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NKX6-1P78426 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX6-1P78426 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 AC021097.1-201ENST00000607902 574 ntBASIC14.37□□□□□ -0.11
NKX6-1P78426 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.37□□□□□ -0.11
NKX6-1P78426 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-1P78426 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-1P78426 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-1P78426 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NKX6-1P78426 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 AC008677.1-201ENST00000519230 1561 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 GPS2P2-201ENST00000430745 888 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 SPCS2P4-201ENST00000436160 681 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 AC069120.2-201ENST00000524091 540 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NKX6-1P78426 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.36□□□□□ -0.11
NKX6-1P78426 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.36□□□□□ -0.11
NKX6-1P78426 AC026150.2-201ENST00000564693 1156 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.36□□□□□ -0.11
NKX6-1P78426 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms