Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H6P61129 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H6P61129 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H6P61129 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.41■■□□□ 1.02
ZC3H6P61129 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZC3H6P61129 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 AC243562.2-201ENST00000561247 970 ntBASIC21.41■■□□□ 1.02
ZC3H6P61129 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3H6P61129 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H6P61129 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H6P61129 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H6P61129 UBALD1-205ENST00000590891 2641 ntBASIC21.41■■□□□ 1.02
ZC3H6P61129 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3H6P61129 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ZC3H6P61129 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ZC3H6P61129 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H6P61129 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3H6P61129 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H6P61129 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.4■■□□□ 1.02
ZC3H6P61129 AC009486.1-201ENST00000569860 813 ntBASIC21.4■■□□□ 1.02
ZC3H6P61129 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.4■■□□□ 1.02
ZC3H6P61129 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 AL118558.3-201ENST00000607414 1079 ntBASIC21.4■■□□□ 1.02
ZC3H6P61129 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H6P61129 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H6P61129 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ZC3H6P61129 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZC3H6P61129 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZC3H6P61129 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
ZC3H6P61129 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.39■■□□□ 1.02
ZC3H6P61129 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.39■■□□□ 1.02
ZC3H6P61129 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZC3H6P61129 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
ZC3H6P61129 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZC3H6P61129 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.39■■□□□ 1.01
ZC3H6P61129 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H6P61129 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.39■■□□□ 1.01
ZC3H6P61129 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.39■■□□□ 1.01
ZC3H6P61129 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 PCDHB18P-201ENST00000524813 2368 ntBASIC21.39■■□□□ 1.01
ZC3H6P61129 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.39■■□□□ 1.01
ZC3H6P61129 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
ZC3H6P61129 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H6P61129 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H6P61129 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
ZC3H6P61129 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
ZC3H6P61129 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3H6P61129 AC005915.1-201ENST00000624912 2018 ntBASIC21.38■■□□□ 1.01
ZC3H6P61129 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3H6P61129 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H6P61129 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3H6P61129 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms