Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 LINC02012-201ENST00000608206 1725 ntBASIC18.59■□□□□ 0.57
CHMP4BP1P59074 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP4BP1P59074 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP4BP1P59074 AC022188.1-201ENST00000620960 1664 ntBASIC18.58■□□□□ 0.57
CHMP4BP1P59074 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 MIR346-201ENST00000362234 95 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 KRT18P34-201ENST00000488218 1270 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AL158211.3-201ENST00000607385 239 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AC008761.3-201ENST00000624803 892 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AC084121.4-201ENST00000641598 221 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AF228730.8-201ENST00000642140 221 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AC092053.1-201ENST00000605787 1936 ntBASIC18.58■□□□□ 0.56
CHMP4BP1P59074 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP4BP1P59074 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AL513523.2-202ENST00000427283 2040 ntBASIC18.57■□□□□ 0.56
CHMP4BP1P59074 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AL662844.4-201ENST00000606367 2838 ntBASIC18.57■□□□□ 0.56
CHMP4BP1P59074 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.57■□□□□ 0.56
CHMP4BP1P59074 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AC092580.3-201ENST00000430932 139 ntBASIC18.57■□□□□ 0.56
CHMP4BP1P59074 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AC021097.1-201ENST00000607902 574 ntBASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms