Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN20P56880 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN20P56880 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 AC006538.1-201ENST00000567905 1585 ntBASIC14.93□□□□□ -0.02
CLDN20P56880 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 AL031731.1-201ENST00000642131 2094 ntBASIC14.93□□□□□ -0.02
CLDN20P56880 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN20P56880 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 AC092183.1-201ENST00000469884 875 ntBASIC14.92□□□□□ -0.02
CLDN20P56880 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.92□□□□□ -0.02
CLDN20P56880 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CLDN20P56880 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN20P56880 AC004835.2-201ENST00000603762 682 ntBASIC14.92□□□□□ -0.02
CLDN20P56880 AC027612.4-201ENST00000605371 583 ntBASIC14.92□□□□□ -0.02
CLDN20P56880 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDN20P56880 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 HLA-A-202ENST00000376806 1854 ntBASIC14.92□□□□□ -0.02
CLDN20P56880 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLDN20P56880 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN20P56880 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLDN20P56880 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN20P56880 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDN20P56880 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN20P56880 SPCS2P4-201ENST00000436160 681 ntBASIC14.91□□□□□ -0.02
CLDN20P56880 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 AL592309.1-201ENST00000443127 649 ntBASIC14.91□□□□□ -0.02
CLDN20P56880 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 AC093520.2-201ENST00000561830 333 ntBASIC14.91□□□□□ -0.02
CLDN20P56880 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.91□□□□□ -0.02
CLDN20P56880 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms