Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 REXO1L8P-201ENST00000604378 1897 ntBASIC12.08□□□□□ -0.48
CMC4P56277 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CMC4P56277 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CMC4P56277 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 AC004987.2-201ENST00000395959 1148 ntBASIC12.08□□□□□ -0.48
CMC4P56277 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.08□□□□□ -0.48
CMC4P56277 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.08□□□□□ -0.48
CMC4P56277 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.08□□□□□ -0.48
CMC4P56277 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.08□□□□□ -0.48
CMC4P56277 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 TUBB3P1-201ENST00000405796 1332 ntBASIC12.08□□□□□ -0.48
CMC4P56277 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.08□□□□□ -0.48
CMC4P56277 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CMC4P56277 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 METTL21AP1-201ENST00000438852 635 ntBASIC12.07□□□□□ -0.48
CMC4P56277 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.07□□□□□ -0.48
CMC4P56277 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.07□□□□□ -0.48
CMC4P56277 PCDHA3-202ENST00000532566 4594 ntBASIC12.07□□□□□ -0.48
CMC4P56277 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 AC011676.5-201ENST00000624864 2660 ntBASIC12.07□□□□□ -0.48
CMC4P56277 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms