Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
PDE1AP54750 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.77■□□□□ 0.76
PDE1AP54750 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDE1AP54750 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PDE1AP54750 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDE1AP54750 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
PDE1AP54750 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.77■□□□□ 0.75
PDE1AP54750 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDE1AP54750 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDE1AP54750 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDE1AP54750 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.76■□□□□ 0.75
PDE1AP54750 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.76■□□□□ 0.75
PDE1AP54750 AP000344.2-201ENST00000512987 629 ntBASIC19.76■□□□□ 0.75
PDE1AP54750 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE1AP54750 AC092865.5-201ENST00000545435 363 ntBASIC19.76■□□□□ 0.75
PDE1AP54750 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE1AP54750 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PDE1AP54750 RARRES2P9-201ENST00000565168 469 ntBASIC19.76■□□□□ 0.75
PDE1AP54750 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE1AP54750 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PDE1AP54750 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDE1AP54750 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE1AP54750 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 BNIP3P1-202ENST00000550043 1585 ntBASIC19.75■□□□□ 0.75
PDE1AP54750 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDE1AP54750 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE1AP54750 RPS8P6-201ENST00000426177 609 ntBASIC19.75■□□□□ 0.75
PDE1AP54750 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE1AP54750 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE1AP54750 AC055717.3-201ENST00000622967 595 ntBASIC19.75■□□□□ 0.75
PDE1AP54750 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE1AP54750 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 AP003680.1-201ENST00000598970 3660 ntBASIC19.75■□□□□ 0.75
PDE1AP54750 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE1AP54750 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDE1AP54750 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PDE1AP54750 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms