Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CLCN3P51790 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCN3P51790 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CLCN3P51790 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 AC245100.5-201ENST00000452108 331 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 RN7SL692P-201ENST00000464677 288 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCN3P51790 AL596325.1-201ENST00000563991 1082 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 AC025048.3-201ENST00000590609 569 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 AC027307.3-201ENST00000594262 1100 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN3P51790 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCN3P51790 AC005702.4-201ENST00000618393 416 ntBASIC17.74■□□□□ 0.43
CLCN3P51790 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLCN3P51790 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLCN3P51790 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN3P51790 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN3P51790 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN3P51790 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
CLCN3P51790 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN3P51790 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCN3P51790 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN3P51790 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCN3P51790 SRD5A3P1-201ENST00000603021 949 ntBASIC17.73■□□□□ 0.43
CLCN3P51790 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCN3P51790 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN3P51790 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCN3P51790 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN3P51790 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.72■□□□□ 0.43
CLCN3P51790 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CLCN3P51790 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 AC092364.2-201ENST00000596710 2692 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLCN3P51790 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 PCDHA14-201ENST00000506751 2298 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
CLCN3P51790 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 AC004987.2-201ENST00000395959 1148 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 AZGP1P1-201ENST00000411909 902 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 AC243562.2-201ENST00000561247 970 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 TP53TG3HP-202ENST00000569755 579 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 AC140912.1-201ENST00000577171 1054 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms