Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PDE6CP51160 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6CP51160 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6CP51160 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6CP51160 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.58■□□□□ 0.4
PDE6CP51160 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.58■□□□□ 0.4
PDE6CP51160 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 TIMM8BP1-201ENST00000452384 211 ntBASIC17.58■□□□□ 0.4
PDE6CP51160 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PDE6CP51160 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6CP51160 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.58■□□□□ 0.4
PDE6CP51160 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.58■□□□□ 0.4
PDE6CP51160 AC027612.4-201ENST00000605371 583 ntBASIC17.58■□□□□ 0.4
PDE6CP51160 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6CP51160 AC099522.2-201ENST00000607001 744 ntBASIC17.58■□□□□ 0.4
PDE6CP51160 U82695.1-201ENST00000635752 1889 ntBASIC17.58■□□□□ 0.4
PDE6CP51160 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6CP51160 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PDE6CP51160 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 AC023141.5-201ENST00000458585 616 ntBASIC17.57■□□□□ 0.4
PDE6CP51160 KRT18P34-201ENST00000488218 1270 ntBASIC17.57■□□□□ 0.4
PDE6CP51160 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.57■□□□□ 0.4
PDE6CP51160 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 AL355385.1-201ENST00000606123 409 ntBASIC17.57■□□□□ 0.4
PDE6CP51160 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6CP51160 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6CP51160 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6CP51160 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6CP51160 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PDE6CP51160 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 LINC00554-201ENST00000564841 3011 ntBASIC17.56■□□□□ 0.4
PDE6CP51160 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.56■□□□□ 0.4
PDE6CP51160 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6CP51160 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 AC025678.2-201ENST00000562061 970 ntBASIC17.56■□□□□ 0.4
PDE6CP51160 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms