Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.9■□□□□ 0.3
FNTAP49354 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.9■□□□□ 0.3
FNTAP49354 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.9■□□□□ 0.3
FNTAP49354 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FNTAP49354 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.9■□□□□ 0.3
FNTAP49354 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.9■□□□□ 0.3
FNTAP49354 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
FNTAP49354 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.9■□□□□ 0.3
FNTAP49354 SSR4P1-203ENST00000599569 2260 ntBASIC16.9■□□□□ 0.3
FNTAP49354 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
FNTAP49354 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNTAP49354 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.9■□□□□ 0.3
FNTAP49354 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.89■□□□□ 0.3
FNTAP49354 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNTAP49354 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.89■□□□□ 0.29
FNTAP49354 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 HAUS4P1-201ENST00000406739 1145 ntBASIC16.89■□□□□ 0.29
FNTAP49354 PMS2P4-201ENST00000412466 1052 ntBASIC16.89■□□□□ 0.29
FNTAP49354 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.89■□□□□ 0.29
FNTAP49354 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.89■□□□□ 0.29
FNTAP49354 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.89■□□□□ 0.29
FNTAP49354 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.89■□□□□ 0.29
FNTAP49354 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.89■□□□□ 0.29
FNTAP49354 LINC01711-201ENST00000598340 967 ntBASIC16.89■□□□□ 0.29
FNTAP49354 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
FNTAP49354 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.89■□□□□ 0.29
FNTAP49354 AC008735.5-201ENST00000623544 497 ntBASIC16.89■□□□□ 0.29
FNTAP49354 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 NFIC-211ENST00000641145 8399 ntBASIC16.89■□□□□ 0.29
FNTAP49354 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.89■□□□□ 0.29
FNTAP49354 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNTAP49354 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FNTAP49354 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FNTAP49354 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.88■□□□□ 0.29
FNTAP49354 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FNTAP49354 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 HMGA1P7-201ENST00000406908 502 ntBASIC16.88■□□□□ 0.29
FNTAP49354 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.88■□□□□ 0.29
FNTAP49354 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 AC245100.5-201ENST00000452108 331 ntBASIC16.88■□□□□ 0.29
FNTAP49354 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.88■□□□□ 0.29
FNTAP49354 AC073648.2-201ENST00000510116 352 ntBASIC16.88■□□□□ 0.29
FNTAP49354 PRELID1P1-202ENST00000567272 903 ntBASIC16.88■□□□□ 0.29
FNTAP49354 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.88■□□□□ 0.29
FNTAP49354 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
FNTAP49354 AL356488.2-201ENST00000602755 427 ntBASIC16.88■□□□□ 0.29
FNTAP49354 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.88■□□□□ 0.29
FNTAP49354 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
FNTAP49354 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.88■□□□□ 0.29
FNTAP49354 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FNTAP49354 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNTAP49354 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms