Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
GDNFP39905 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GDNFP39905 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.2□□□□□ -0.14
GDNFP39905 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.2□□□□□ -0.14
GDNFP39905 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 RBM17P3-201ENST00000417687 1192 ntBASIC14.2□□□□□ -0.14
GDNFP39905 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.2□□□□□ -0.14
GDNFP39905 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.2□□□□□ -0.14
GDNFP39905 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
GDNFP39905 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.2□□□□□ -0.14
GDNFP39905 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDNFP39905 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GDNFP39905 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 CICP24-201ENST00000605464 2705 ntBASIC14.19□□□□□ -0.14
GDNFP39905 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 ACTG1P4-201ENST00000425123 1122 ntBASIC14.19□□□□□ -0.14
GDNFP39905 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.19□□□□□ -0.14
GDNFP39905 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 AC064862.7-201ENST00000604520 867 ntBASIC14.19□□□□□ -0.14
GDNFP39905 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GDNFP39905 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms