Protein–RNA interactions for Protein: P39900

MMP12, Macrophage metalloelastase, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12P39900 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
MMP12P39900 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP12P39900 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP12P39900 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP12P39900 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MMP12P39900 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP12P39900 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 MIR648-201ENST00000385046 94 ntBASIC16.06■□□□□ 0.16
MMP12P39900 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.06■□□□□ 0.16
MMP12P39900 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP12P39900 HIST3H2BA-201ENST00000436555 524 ntBASIC16.06■□□□□ 0.16
MMP12P39900 AC002472.2-201ENST00000442739 958 ntBASIC16.06■□□□□ 0.16
MMP12P39900 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP12P39900 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP12P39900 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP12P39900 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP12P39900 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP12P39900 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
MMP12P39900 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MMP12P39900 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 BNIP3P1-202ENST00000550043 1585 ntBASIC16.05■□□□□ 0.16
MMP12P39900 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 AC236430.1-201ENST00000402231 743 ntBASIC16.05■□□□□ 0.16
MMP12P39900 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.05■□□□□ 0.16
MMP12P39900 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
MMP12P39900 MIR6069-201ENST00000620069 79 ntBASIC16.05■□□□□ 0.16
MMP12P39900 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 AL596087.1-201ENST00000400979 1969 ntBASIC16.05■□□□□ 0.16
MMP12P39900 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP12P39900 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP12P39900 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP12P39900 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP12P39900 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP12P39900 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms