Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 AC069148.1-201ENST00000608741 768 ntBASIC13.43□□□□□ -0.26
SNCAP37840 AC073592.4-201ENST00000623827 446 ntBASIC13.43□□□□□ -0.26
SNCAP37840 AC006486.2-201ENST00000624246 2199 ntBASIC13.43□□□□□ -0.26
SNCAP37840 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 AP000550.4-202ENST00000639755 178 ntBASIC13.43□□□□□ -0.26
SNCAP37840 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SNCAP37840 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AC243591.1-201ENST00000452967 1364 ntBASIC13.43□□□□□ -0.26
SNCAP37840 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 NCF1C-201ENST00000438382 1427 ntBASIC13.42□□□□□ -0.26
SNCAP37840 AC007292.2-201ENST00000593524 1812 ntBASIC13.42□□□□□ -0.26
SNCAP37840 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 KRT16P4-201ENST00000453883 522 ntBASIC13.42□□□□□ -0.26
SNCAP37840 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.42□□□□□ -0.26
SNCAP37840 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.42□□□□□ -0.26
SNCAP37840 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 TERC-201ENST00000602385 541 ntBASIC13.42□□□□□ -0.26
SNCAP37840 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 AL139011.1-202ENST00000642063 584 ntBASIC13.42□□□□□ -0.26
SNCAP37840 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 AC138969.2-201ENST00000532739 9932 ntBASIC13.42□□□□□ -0.26
SNCAP37840 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCAP37840 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCAP37840 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCAP37840 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 CICP24-201ENST00000605464 2705 ntBASIC13.41□□□□□ -0.26
SNCAP37840 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms