Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AP005117.1-202ENST00000581724 1908 ntBASIC14.82□□□□□ -0.04
CD53P19397 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.82□□□□□ -0.04
CD53P19397 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.81□□□□□ -0.04
CD53P19397 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.81□□□□□ -0.04
CD53P19397 BCRP1-201ENST00000444246 691 ntBASIC14.81□□□□□ -0.04
CD53P19397 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.81□□□□□ -0.04
CD53P19397 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.81□□□□□ -0.04
CD53P19397 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.81□□□□□ -0.04
CD53P19397 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.81□□□□□ -0.04
CD53P19397 AC023141.13-201ENST00000604991 943 ntBASIC14.81□□□□□ -0.04
CD53P19397 AL096865.1-201ENST00000606796 927 ntBASIC14.81□□□□□ -0.04
CD53P19397 AL513210.1-201ENST00000629608 234 ntBASIC14.81□□□□□ -0.04
CD53P19397 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.81□□□□□ -0.04
CD53P19397 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CD53P19397 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.81□□□□□ -0.04
CD53P19397 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.81□□□□□ -0.04
CD53P19397 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.81□□□□□ -0.04
CD53P19397 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD53P19397 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 AC097637.2-201ENST00000624096 1997 ntBASIC14.8□□□□□ -0.04
CD53P19397 AC145098.2-201ENST00000623593 3026 ntBASIC14.8□□□□□ -0.04
CD53P19397 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.8□□□□□ -0.04
CD53P19397 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.8□□□□□ -0.04
CD53P19397 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.8□□□□□ -0.04
CD53P19397 COX20P2-201ENST00000452636 358 ntBASIC14.8□□□□□ -0.04
CD53P19397 POU5F1P6-201ENST00000466990 990 ntBASIC14.8□□□□□ -0.04
CD53P19397 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.8□□□□□ -0.04
CD53P19397 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.8□□□□□ -0.04
CD53P19397 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.8□□□□□ -0.04
CD53P19397 AL353135.1-201ENST00000606729 504 ntBASIC14.8□□□□□ -0.04
CD53P19397 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.8□□□□□ -0.04
CD53P19397 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
CD53P19397 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms