Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CTLA4P16410 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CTLA4P16410 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CTLA4P16410 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 AC026396.1-201ENST00000419388 421 ntBASIC14.42□□□□□ -0.1
CTLA4P16410 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.42□□□□□ -0.1
CTLA4P16410 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 AC245100.5-201ENST00000452108 331 ntBASIC14.42□□□□□ -0.1
CTLA4P16410 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CTLA4P16410 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.42□□□□□ -0.1
CTLA4P16410 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
CTLA4P16410 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTLA4P16410 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTLA4P16410 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTLA4P16410 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTLA4P16410 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 RARRES2P8-201ENST00000566335 367 ntBASIC14.41□□□□□ -0.1
CTLA4P16410 AL138918.1-201ENST00000568306 659 ntBASIC14.41□□□□□ -0.1
CTLA4P16410 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CTLA4P16410 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTLA4P16410 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.41□□□□□ -0.1
CTLA4P16410 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CTLA4P16410 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CTLA4P16410 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.4□□□□□ -0.1
CTLA4P16410 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 MIR4321-201ENST00000592276 80 ntBASIC14.4□□□□□ -0.1
CTLA4P16410 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms