Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.91■□□□□ 0.3
TCF4P15884 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.91■□□□□ 0.3
TCF4P15884 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.91■□□□□ 0.3
TCF4P15884 AC079140.1-201ENST00000508039 487 ntBASIC16.91■□□□□ 0.3
TCF4P15884 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.91■□□□□ 0.3
TCF4P15884 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.91■□□□□ 0.3
TCF4P15884 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.91■□□□□ 0.3
TCF4P15884 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.91■□□□□ 0.3
TCF4P15884 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCF4P15884 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCF4P15884 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCF4P15884 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.91■□□□□ 0.3
TCF4P15884 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCF4P15884 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.9■□□□□ 0.3
TCF4P15884 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.9■□□□□ 0.3
TCF4P15884 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.9■□□□□ 0.3
TCF4P15884 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.9■□□□□ 0.3
TCF4P15884 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.9■□□□□ 0.3
TCF4P15884 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.9■□□□□ 0.3
TCF4P15884 AC061975.2-201ENST00000581722 295 ntBASIC16.9■□□□□ 0.3
TCF4P15884 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 C20orf181-201ENST00000623918 480 ntBASIC16.9■□□□□ 0.3
TCF4P15884 AC008267.7-201ENST00000624570 1194 ntBASIC16.9■□□□□ 0.3
TCF4P15884 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TCF4P15884 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCF4P15884 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TCF4P15884 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TCF4P15884 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.89■□□□□ 0.3
TCF4P15884 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.89■□□□□ 0.3
TCF4P15884 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TCF4P15884 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TCF4P15884 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.89■□□□□ 0.29
TCF4P15884 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TCF4P15884 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TCF4P15884 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TCF4P15884 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TCF4P15884 HTR5BP-201ENST00000430851 1154 ntBASIC16.89■□□□□ 0.29
TCF4P15884 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.89■□□□□ 0.29
TCF4P15884 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.89■□□□□ 0.29
TCF4P15884 AC105233.2-201ENST00000523697 349 ntBASIC16.89■□□□□ 0.29
TCF4P15884 AF228730.5-201ENST00000530288 346 ntBASIC16.89■□□□□ 0.29
TCF4P15884 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.89■□□□□ 0.29
TCF4P15884 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.89■□□□□ 0.29
TCF4P15884 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.89■□□□□ 0.29
TCF4P15884 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.89■□□□□ 0.29
TCF4P15884 AL365330.1-201ENST00000607459 531 ntBASIC16.89■□□□□ 0.29
TCF4P15884 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.89■□□□□ 0.29
TCF4P15884 SPTSSB-204ENST00000617024 1292 ntBASIC16.89■□□□□ 0.29
TCF4P15884 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TCF4P15884 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.89■□□□□ 0.29
TCF4P15884 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCF4P15884 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms