Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
BCKDHAP12694 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BCKDHAP12694 AC073347.1-201ENST00000421633 2643 ntBASIC15.53■□□□□ 0.08
BCKDHAP12694 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.53■□□□□ 0.08
BCKDHAP12694 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.53■□□□□ 0.08
BCKDHAP12694 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.53■□□□□ 0.08
BCKDHAP12694 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BCKDHAP12694 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BCKDHAP12694 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
BCKDHAP12694 AL589702.1-201ENST00000641229 1509 ntBASIC15.53■□□□□ 0.08
BCKDHAP12694 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BCKDHAP12694 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.53■□□□□ 0.08
BCKDHAP12694 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.53■□□□□ 0.08
BCKDHAP12694 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.52■□□□□ 0.08
BCKDHAP12694 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 AC022532.1-201ENST00000624563 1728 ntBASIC15.52■□□□□ 0.08
BCKDHAP12694 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
BCKDHAP12694 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
BCKDHAP12694 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
BCKDHAP12694 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
BCKDHAP12694 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
BCKDHAP12694 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 AC245100.5-201ENST00000452108 331 ntBASIC15.52■□□□□ 0.08
BCKDHAP12694 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.52■□□□□ 0.08
BCKDHAP12694 AC018845.2-201ENST00000568326 409 ntBASIC15.52■□□□□ 0.08
BCKDHAP12694 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.52■□□□□ 0.08
BCKDHAP12694 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BCKDHAP12694 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.52■□□□□ 0.08
BCKDHAP12694 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.07
BCKDHAP12694 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.52■□□□□ 0.07
BCKDHAP12694 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BCKDHAP12694 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
BCKDHAP12694 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
BCKDHAP12694 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.51■□□□□ 0.07
BCKDHAP12694 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
BCKDHAP12694 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.51■□□□□ 0.07
BCKDHAP12694 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 KRT19P2-202ENST00000557173 1012 ntBASIC15.51■□□□□ 0.07
BCKDHAP12694 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 AC034105.1-201ENST00000563488 319 ntBASIC15.51■□□□□ 0.07
BCKDHAP12694 AC145285.3-201ENST00000564603 959 ntBASIC15.51■□□□□ 0.07
BCKDHAP12694 AC002347.1-201ENST00000569543 541 ntBASIC15.51■□□□□ 0.07
BCKDHAP12694 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.51■□□□□ 0.07
BCKDHAP12694 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BCKDHAP12694 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.51■□□□□ 0.07
BCKDHAP12694 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.51■□□□□ 0.07
BCKDHAP12694 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms