Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 AC006058.4-201ENST00000624016 1670 ntBASIC14.3□□□□□ -0.12
UBCP0CG48 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 MIR1224-201ENST00000408193 85 ntBASIC14.3□□□□□ -0.12
UBCP0CG48 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
UBCP0CG48 PMS2P4-201ENST00000412466 1052 ntBASIC14.3□□□□□ -0.12
UBCP0CG48 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.3□□□□□ -0.12
UBCP0CG48 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.3□□□□□ -0.12
UBCP0CG48 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.3□□□□□ -0.12
UBCP0CG48 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.3□□□□□ -0.12
UBCP0CG48 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 AL031055.1-201ENST00000606362 631 ntBASIC14.3□□□□□ -0.12
UBCP0CG48 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.3□□□□□ -0.12
UBCP0CG48 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBCP0CG48 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UBCP0CG48 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UBCP0CG48 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UBCP0CG48 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 FAM185BP-201ENST00000443595 716 ntBASIC14.29□□□□□ -0.12
UBCP0CG48 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 AC108073.2-201ENST00000464002 357 ntBASIC14.29□□□□□ -0.12
UBCP0CG48 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.29□□□□□ -0.12
UBCP0CG48 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.29□□□□□ -0.12
UBCP0CG48 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.29□□□□□ -0.12
UBCP0CG48 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.29□□□□□ -0.12
UBCP0CG48 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.29□□□□□ -0.12
UBCP0CG48 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 ACTL9-202ENST00000612068 1252 ntBASIC14.29□□□□□ -0.12
UBCP0CG48 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.29□□□□□ -0.12
UBCP0CG48 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBCP0CG48 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.29□□□□□ -0.12
UBCP0CG48 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms