Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC026410.3-201ENST00000514280 936 ntBASIC15.74■□□□□ 0.11
SP9P0CG40 AP001582.1-201ENST00000525856 295 ntBASIC15.74■□□□□ 0.11
SP9P0CG40 HNRNPUP1-201ENST00000554987 333 ntBASIC15.74■□□□□ 0.11
SP9P0CG40 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.74■□□□□ 0.11
SP9P0CG40 AC093813.1-201ENST00000605066 256 ntBASIC15.74■□□□□ 0.11
SP9P0CG40 AC145423.3-201ENST00000615987 467 ntBASIC15.74■□□□□ 0.11
SP9P0CG40 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.74■□□□□ 0.11
SP9P0CG40 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.74■□□□□ 0.11
SP9P0CG40 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.74■□□□□ 0.11
SP9P0CG40 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SP9P0CG40 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.74■□□□□ 0.11
SP9P0CG40 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.74■□□□□ 0.11
SP9P0CG40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.74■□□□□ 0.11
SP9P0CG40 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SP9P0CG40 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SP9P0CG40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SP9P0CG40 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.73■□□□□ 0.11
SP9P0CG40 CYP46A4P-201ENST00000414953 267 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 RPL17P11-201ENST00000417593 544 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 AL133466.1-201ENST00000447582 150 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.73■□□□□ 0.11
SP9P0CG40 AC126915.1-201ENST00000522847 1038 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.73■□□□□ 0.11
SP9P0CG40 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.73■□□□□ 0.11
SP9P0CG40 AC000095.1-201ENST00000603208 874 ntBASIC15.73■□□□□ 0.11
SP9P0CG40 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.73■□□□□ 0.11
SP9P0CG40 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SP9P0CG40 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SP9P0CG40 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SP9P0CG40 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.73■□□□□ 0.11
SP9P0CG40 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 AC004408.2-201ENST00000623613 2777 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 LINC01144-201ENST00000626198 1710 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 HTR7P1-202ENST00000624664 4411 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.72■□□□□ 0.11
SP9P0CG40 MIR769-201ENST00000390225 118 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SP9P0CG40 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.72■□□□□ 0.11
SP9P0CG40 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 POM121L10P-201ENST00000436994 1285 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 FTLP1-201ENST00000449155 526 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 RNA5SP486-201ENST00000515961 83 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
SP9P0CG40 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.72■□□□□ 0.11
SP9P0CG40 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.72■□□□□ 0.11
SP9P0CG40 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.72■□□□□ 0.11
SP9P0CG40 AC006453.4-201ENST00000636949 1252 ntBASIC15.72■□□□□ 0.11
SP9P0CG40 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.72■□□□□ 0.11
SP9P0CG40 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SP9P0CG40 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SP9P0CG40 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
SP9P0CG40 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms