Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL5A2P05997 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 AC018735.1-201ENST00000437208 1502 ntBASIC20.93■□□□□ 0.94
COL5A2P05997 AC138028.6-201ENST00000616106 1482 ntBASIC20.93■□□□□ 0.94
COL5A2P05997 RNF216P1-203ENST00000404404 2427 ntBASIC20.93■□□□□ 0.94
COL5A2P05997 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
COL5A2P05997 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.93■□□□□ 0.94
COL5A2P05997 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 EEF1DP1-201ENST00000585891 896 ntBASIC20.93■□□□□ 0.94
COL5A2P05997 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.93■□□□□ 0.94
COL5A2P05997 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL5A2P05997 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL5A2P05997 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL5A2P05997 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL5A2P05997 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL5A2P05997 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL5A2P05997 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL5A2P05997 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.92■□□□□ 0.94
COL5A2P05997 BTBD6P1-201ENST00000412176 1267 ntBASIC20.92■□□□□ 0.94
COL5A2P05997 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.92■□□□□ 0.94
COL5A2P05997 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.92■□□□□ 0.94
COL5A2P05997 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 HIST2H2BC-201ENST00000498492 580 ntBASIC20.92■□□□□ 0.94
COL5A2P05997 GAPDHP40-201ENST00000505218 1006 ntBASIC20.92■□□□□ 0.94
COL5A2P05997 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.92■□□□□ 0.94
COL5A2P05997 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL5A2P05997 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL5A2P05997 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.91■□□□□ 0.94
COL5A2P05997 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.91■□□□□ 0.94
COL5A2P05997 BX284668.4-201ENST00000453917 508 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 AKR7A2P1-201ENST00000460134 915 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.91■□□□□ 0.94
COL5A2P05997 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.91■□□□□ 0.94
COL5A2P05997 AL096828.3-201ENST00000615354 462 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 AC015967.2-201ENST00000624092 234 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 AC006435.4-201ENST00000625037 234 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 AL356737.1-201ENST00000634391 234 ntBASIC20.91■□□□□ 0.94
COL5A2P05997 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms