Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.17■□□□□ 0.18
CAPNS1P04632 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 ACTG1P4-201ENST00000425123 1122 ntBASIC16.17■□□□□ 0.18
CAPNS1P04632 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPNS1P04632 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 AC004233.3-201ENST00000607794 1269 ntBASIC16.17■□□□□ 0.18
CAPNS1P04632 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 AC100757.3-201ENST00000622361 1406 ntBASIC16.17■□□□□ 0.18
CAPNS1P04632 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
CAPNS1P04632 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CAPNS1P04632 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 MIR1909-201ENST00000411312 80 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AC002558.1-201ENST00000488906 803 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPNS1P04632 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AC017083.2-201ENST00000608069 979 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 AL162274.1-201ENST00000617191 1098 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 ME2P1-201ENST00000426028 1970 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AC022532.1-201ENST00000624563 1728 ntBASIC16.16■□□□□ 0.18
CAPNS1P04632 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPNS1P04632 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPNS1P04632 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
CAPNS1P04632 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPNS1P04632 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CAPNS1P04632 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPNS1P04632 ALOX12P2-203ENST00000570921 1945 ntBASIC16.15■□□□□ 0.18
CAPNS1P04632 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CAPNS1P04632 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPNS1P04632 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPNS1P04632 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms