Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 AC133539.2-201ENST00000604757 467 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 AC009542.2-202ENST00000619004 1067 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL4A1P02462 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.48■□□□□ 0.71
COL4A1P02462 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 SOCS2P1-201ENST00000417727 557 ntBASIC19.48■□□□□ 0.71
COL4A1P02462 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.48■□□□□ 0.71
COL4A1P02462 KRT90P-201ENST00000549264 1064 ntBASIC19.48■□□□□ 0.71
COL4A1P02462 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.48■□□□□ 0.71
COL4A1P02462 AC015910.1-201ENST00000579400 975 ntBASIC19.48■□□□□ 0.71
COL4A1P02462 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.48■□□□□ 0.71
COL4A1P02462 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A1P02462 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A1P02462 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.48■□□□□ 0.71
COL4A1P02462 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A1P02462 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 AC012441.1-201ENST00000446669 685 ntBASIC19.47■□□□□ 0.71
COL4A1P02462 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.47■□□□□ 0.71
COL4A1P02462 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.47■□□□□ 0.71
COL4A1P02462 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
COL4A1P02462 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A1P02462 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A1P02462 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL4A1P02462 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
COL4A1P02462 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
COL4A1P02462 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A1P02462 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL4A1P02462 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A1P02462 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A1P02462 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.46■□□□□ 0.71
COL4A1P02462 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 PCDHA12-202ENST00000613593 2588 ntBASIC19.46■□□□□ 0.71
COL4A1P02462 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.46■□□□□ 0.71
COL4A1P02462 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A1P02462 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A1P02462 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL4A1P02462 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 AC108725.1-201ENST00000495472 409 ntBASIC19.46■□□□□ 0.71
COL4A1P02462 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A1P02462 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A1P02462 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A1P02462 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms