Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 FAM45BP-202ENST00000592932 1624 ntBASIC15.03■□□□□ -0
LGI1O95970 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LGI1O95970 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.02■□□□□ -0
LGI1O95970 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.02■□□□□ -0
LGI1O95970 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.02■□□□□ -0
LGI1O95970 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 AL022342.1-201ENST00000400363 863 ntBASIC15.02■□□□□ -0
LGI1O95970 HAUS4P1-201ENST00000406739 1145 ntBASIC15.02■□□□□ -0
LGI1O95970 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LGI1O95970 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.02■□□□□ -0
LGI1O95970 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.02■□□□□ -0
LGI1O95970 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LGI1O95970 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.02■□□□□ -0
LGI1O95970 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.02■□□□□ -0
LGI1O95970 AC023141.13-201ENST00000604991 943 ntBASIC15.02■□□□□ -0
LGI1O95970 AL365330.1-201ENST00000607459 531 ntBASIC15.02■□□□□ -0
LGI1O95970 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.02■□□□□ -0
LGI1O95970 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LGI1O95970 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.02□□□□□ -0.01
LGI1O95970 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.02□□□□□ -0.01
LGI1O95970 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.02□□□□□ -0.01
LGI1O95970 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LGI1O95970 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 DBET-201ENST00000630918 3363 ntBASIC15.01□□□□□ -0.01
LGI1O95970 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 AC140658.5-201ENST00000438532 169 ntBASIC15.01□□□□□ -0.01
LGI1O95970 AC245100.5-201ENST00000452108 331 ntBASIC15.01□□□□□ -0.01
LGI1O95970 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.01□□□□□ -0.01
LGI1O95970 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.01□□□□□ -0.01
LGI1O95970 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LGI1O95970 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.01□□□□□ -0.01
LGI1O95970 TSPY26P-202ENST00000565928 3884 ntBASIC15.01□□□□□ -0.01
LGI1O95970 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LGI1O95970 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms