Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF8O76064 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF8O76064 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF8O76064 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF8O76064 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF8O76064 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF8O76064 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RNF8O76064 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF8O76064 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF8O76064 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF8O76064 KRT18P58-201ENST00000527480 1120 ntBASIC17.13■□□□□ 0.33
RNF8O76064 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 AC040169.1-201ENST00000565382 521 ntBASIC17.13■□□□□ 0.33
RNF8O76064 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF8O76064 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF8O76064 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF8O76064 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF8O76064 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF8O76064 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF8O76064 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF8O76064 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF8O76064 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF8O76064 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF8O76064 AC073439.1-201ENST00000624121 1774 ntBASIC17.12■□□□□ 0.33
RNF8O76064 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF8O76064 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF8O76064 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF8O76064 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 MIR648-201ENST00000385046 94 ntBASIC17.12■□□□□ 0.33
RNF8O76064 AL022342.1-201ENST00000400363 863 ntBASIC17.12■□□□□ 0.33
RNF8O76064 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 AC023274.1-201ENST00000418278 595 ntBASIC17.12■□□□□ 0.33
RNF8O76064 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF8O76064 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF8O76064 TCAF2P1-201ENST00000291129 2421 ntBASIC17.12■□□□□ 0.33
RNF8O76064 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF8O76064 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF8O76064 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF8O76064 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RNF8O76064 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF8O76064 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF8O76064 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF8O76064 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF8O76064 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF8O76064 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF8O76064 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF8O76064 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF8O76064 PRYP6-201ENST00000514804 343 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms