Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AP000867.3-201ENST00000524675 377 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 AL049597.2-201ENST00000565575 961 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 MIR3180-1-201ENST00000580374 94 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 MPDU1-223ENST00000582151 728 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 MIR3180-3-201ENST00000584616 94 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 AC099336.1-202ENST00000602961 463 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 AL139424.1-201ENST00000607572 797 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ZNF253O75346 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 RBM17P3-201ENST00000417687 1192 ntBASIC12.72□□□□□ -0.37
ZNF253O75346 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF253O75346 AC106795.1-205ENST00000512851 1056 ntBASIC12.72□□□□□ -0.37
ZNF253O75346 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF253O75346 MIR4492-201ENST00000581627 80 ntBASIC12.72□□□□□ -0.37
ZNF253O75346 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
ZNF253O75346 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF253O75346 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF253O75346 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ZNF253O75346 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 SNX33P1-201ENST00000592116 1762 ntBASIC12.71□□□□□ -0.37
ZNF253O75346 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms