Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 KRT18P31-201ENST00000506277 1292 ntBASIC15.83■□□□□ 0.12
HDAC3O15379 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 U1.21-201ENST00000580816 167 ntBASIC15.83■□□□□ 0.12
HDAC3O15379 MIR4515-201ENST00000584082 81 ntBASIC15.83■□□□□ 0.12
HDAC3O15379 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.83■□□□□ 0.12
HDAC3O15379 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.83■□□□□ 0.12
HDAC3O15379 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 AC138035.3-201ENST00000622706 2791 ntBASIC15.83■□□□□ 0.12
HDAC3O15379 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.83■□□□□ 0.12
HDAC3O15379 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.83■□□□□ 0.12
HDAC3O15379 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HDAC3O15379 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.83■□□□□ 0.12
HDAC3O15379 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.83■□□□□ 0.12
HDAC3O15379 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HDAC3O15379 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.82■□□□□ 0.12
HDAC3O15379 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 IGHV3-65-201ENST00000523210 341 ntBASIC15.82■□□□□ 0.12
HDAC3O15379 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.82■□□□□ 0.12
HDAC3O15379 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.82■□□□□ 0.12
HDAC3O15379 MIR3909-201ENST00000579518 119 ntBASIC15.82■□□□□ 0.12
HDAC3O15379 REXO1L6P-202ENST00000619970 1078 ntBASIC15.82■□□□□ 0.12
HDAC3O15379 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC3O15379 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.82■□□□□ 0.12
HDAC3O15379 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC3O15379 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HDAC3O15379 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
HDAC3O15379 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC3O15379 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC3O15379 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 AC245100.5-201ENST00000452108 331 ntBASIC15.81■□□□□ 0.12
HDAC3O15379 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HDAC3O15379 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC3O15379 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC3O15379 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HDAC3O15379 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.81■□□□□ 0.12
HDAC3O15379 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.81■□□□□ 0.12
HDAC3O15379 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC3O15379 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.81■□□□□ 0.12
HDAC3O15379 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.81■□□□□ 0.12
HDAC3O15379 FAM45BP-202ENST00000592932 1624 ntBASIC15.81■□□□□ 0.12
HDAC3O15379 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms