Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CEP290O15078 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CEP290O15078 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 AL138709.1-201ENST00000614840 1693 ntBASIC17.26■□□□□ 0.35
CEP290O15078 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.26■□□□□ 0.35
CEP290O15078 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.26■□□□□ 0.35
CEP290O15078 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 AP003392.6-201ENST00000607709 325 ntBASIC17.26■□□□□ 0.35
CEP290O15078 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CEP290O15078 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.25■□□□□ 0.35
CEP290O15078 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CEP290O15078 Z97180.1-201ENST00000445173 988 ntBASIC17.25■□□□□ 0.35
CEP290O15078 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 AC026410.3-201ENST00000514280 936 ntBASIC17.25■□□□□ 0.35
CEP290O15078 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.25■□□□□ 0.35
CEP290O15078 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.25■□□□□ 0.35
CEP290O15078 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 AC100757.4-201ENST00000626934 759 ntBASIC17.25■□□□□ 0.35
CEP290O15078 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 PCDHB17P-201ENST00000539533 2393 ntBASIC17.25■□□□□ 0.35
CEP290O15078 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.25■□□□□ 0.35
CEP290O15078 CNN2P10-201ENST00000443067 918 ntBASIC17.25■□□□□ 0.35
CEP290O15078 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.25■□□□□ 0.35
CEP290O15078 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CEP290O15078 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEP290O15078 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 NOC2LP1-201ENST00000450578 752 ntBASIC17.24■□□□□ 0.35
CEP290O15078 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
CEP290O15078 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 AC026316.1-201ENST00000398900 414 ntBASIC17.24■□□□□ 0.35
CEP290O15078 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.24■□□□□ 0.35
CEP290O15078 FGFR3P1-201ENST00000449999 601 ntBASIC17.24■□□□□ 0.35
CEP290O15078 RN7SL11P-201ENST00000471305 293 ntBASIC17.24■□□□□ 0.35
CEP290O15078 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.24■□□□□ 0.35
CEP290O15078 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.24■□□□□ 0.35
CEP290O15078 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEP290O15078 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
CEP290O15078 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms