Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 AC132938.4-201ENST00000623835 848 ntBASIC22.03■■□□□ 1.12
CHD2O14647 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC22.03■■□□□ 1.12
CHD2O14647 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 AL354989.2-201ENST00000435838 1540 ntBASIC22.03■■□□□ 1.12
CHD2O14647 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 KRT8P35-201ENST00000483942 1338 ntBASIC22.03■■□□□ 1.12
CHD2O14647 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.03■■□□□ 1.12
CHD2O14647 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CHD2O14647 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 AP003171.2-201ENST00000528208 925 ntBASIC22.03■■□□□ 1.12
CHD2O14647 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC22.03■■□□□ 1.12
CHD2O14647 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC22.03■■□□□ 1.12
CHD2O14647 MIR5572-201ENST00000583188 137 ntBASIC22.03■■□□□ 1.12
CHD2O14647 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.03■■□□□ 1.12
CHD2O14647 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC22.03■■□□□ 1.12
CHD2O14647 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD2O14647 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CHD2O14647 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CHD2O14647 AC134407.2-201ENST00000625089 1978 ntBASIC22.02■■□□□ 1.12
CHD2O14647 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 HLA-DQB2-229ENST00000411527 1059 ntBASIC22.02■■□□□ 1.12
CHD2O14647 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC22.02■■□□□ 1.12
CHD2O14647 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC22.02■■□□□ 1.12
CHD2O14647 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC22.02■■□□□ 1.12
CHD2O14647 AC018635.2-201ENST00000608625 364 ntBASIC22.02■■□□□ 1.12
CHD2O14647 AP005019.2-201ENST00000615104 511 ntBASIC22.02■■□□□ 1.12
CHD2O14647 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 REXO1L1P-202ENST00000608646 1974 ntBASIC22.02■■□□□ 1.12
CHD2O14647 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD2O14647 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CHD2O14647 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.02■■□□□ 1.12
CHD2O14647 GCK-202ENST00000345378 2421 ntTSL 2 BASIC22.02■■□□□ 1.12
CHD2O14647 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
CHD2O14647 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHD2O14647 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 FTLP10-202ENST00000505798 471 ntBASIC22.01■■□□□ 1.11
CHD2O14647 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC22.01■■□□□ 1.11
CHD2O14647 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC22.01■■□□□ 1.11
CHD2O14647 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 AC092978.1-202ENST00000637590 1327 ntBASIC22.01■■□□□ 1.11
CHD2O14647 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.01■■□□□ 1.11
CHD2O14647 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.01■■□□□ 1.11
CHD2O14647 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 IGF1-203ENST00000392904 761 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 CYP46A4P-201ENST00000414953 267 ntBASIC22.01■■□□□ 1.11
CHD2O14647 NKAIN1P1-201ENST00000435754 582 ntBASIC22.01■■□□□ 1.11
CHD2O14647 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 AC245884.6-201ENST00000515672 1067 ntBASIC22.01■■□□□ 1.11
CHD2O14647 AC005730.2-201ENST00000564549 1184 ntBASIC22.01■■□□□ 1.11
CHD2O14647 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 KLK11-210ENST00000600362 759 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD2O14647 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD2O14647 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CHD2O14647 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms