Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX39AO00148 TSSK5P-201ENST00000423978 907 ntBASIC18.23■□□□□ 0.51
DDX39AO00148 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX39AO00148 AL365330.1-201ENST00000607459 531 ntBASIC18.23■□□□□ 0.51
DDX39AO00148 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX39AO00148 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
DDX39AO00148 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX39AO00148 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX39AO00148 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX39AO00148 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX39AO00148 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DDX39AO00148 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX39AO00148 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
DDX39AO00148 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX39AO00148 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
DDX39AO00148 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 MIR661-201ENST00000384842 89 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX39AO00148 AL080243.2-201ENST00000418783 582 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 TSPY16P-201ENST00000449843 468 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX39AO00148 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 AC004890.2-204ENST00000481968 304 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.22■□□□□ 0.51
DDX39AO00148 MIR3197-201ENST00000582241 73 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX39AO00148 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX39AO00148 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 AL136982.4-201ENST00000437689 1740 ntBASIC18.22■□□□□ 0.51
DDX39AO00148 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
DDX39AO00148 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX39AO00148 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX39AO00148 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX39AO00148 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX39AO00148 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX39AO00148 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 AC236430.1-201ENST00000402231 743 ntBASIC18.21■□□□□ 0.51
DDX39AO00148 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
DDX39AO00148 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX39AO00148 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX39AO00148 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.21■□□□□ 0.51
DDX39AO00148 AC026979.3-201ENST00000607315 403 ntBASIC18.21■□□□□ 0.51
DDX39AO00148 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX39AO00148 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.21■□□□□ 0.51
DDX39AO00148 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms