Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AL353705.2-201ENST00000428243 662 ntBASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 RNA5SP410-201ENST00000516285 106 ntBASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 AC007967.4-201ENST00000614700 386 ntBASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA3F8WFD2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC100757.3-201ENST00000622361 1406 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 MIR661-201ENST00000384842 89 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 MTND6P24-201ENST00000440466 518 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC098859.1-201ENST00000502915 1238 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC190387.1-201ENST00000551683 408 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 LINC02560-201ENST00000596379 459 ntBASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA3F8WFD2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA3F8WFD2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms