Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 GGT4P-201ENST00000623672 1708 ntBASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 PCGF3-213ENST00000620529 1899 ntBASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA2E9PIF3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AL353705.2-201ENST00000428243 662 ntBASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 RNA5SP410-201ENST00000516285 106 ntBASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 AC007967.4-201ENST00000614700 386 ntBASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA2E9PIF3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC100757.3-201ENST00000622361 1406 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 MIR661-201ENST00000384842 89 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 MTND6P24-201ENST00000440466 518 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC098859.1-201ENST00000502915 1238 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC190387.1-201ENST00000551683 408 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms