Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
COLCA2A8K830 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
COLCA2A8K830 KRT8P49-201ENST00000604166 1432 ntBASIC12.44□□□□□ -0.42
COLCA2A8K830 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.44□□□□□ -0.42
COLCA2A8K830 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.44□□□□□ -0.42
COLCA2A8K830 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
COLCA2A8K830 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COLCA2A8K830 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.43□□□□□ -0.42
COLCA2A8K830 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 AC110285.6-201ENST00000617652 491 ntBASIC12.43□□□□□ -0.42
COLCA2A8K830 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.43□□□□□ -0.42
COLCA2A8K830 HLA-B-256ENST00000639848 1089 ntBASIC12.43□□□□□ -0.42
COLCA2A8K830 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
COLCA2A8K830 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.43□□□□□ -0.42
COLCA2A8K830 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
COLCA2A8K830 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COLCA2A8K830 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
COLCA2A8K830 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
COLCA2A8K830 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.42□□□□□ -0.42
COLCA2A8K830 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
COLCA2A8K830 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
COLCA2A8K830 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.42□□□□□ -0.42
COLCA2A8K830 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.42□□□□□ -0.42
COLCA2A8K830 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COLCA2A8K830 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms