Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 AC007950.2-201ENST00000615045 2347 ntBASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 MKNK2P1-201ENST00000437526 628 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SPDYE11-202ENST00000450699 704 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AC079140.1-201ENST00000508039 487 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AC105233.2-201ENST00000523697 349 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AF228730.5-201ENST00000530288 346 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SPDYE9P-201ENST00000570642 692 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SPDYE10P-202ENST00000612005 668 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 SPDYE8P-202ENST00000612377 668 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 AC008267.7-201ENST00000624570 1194 ntBASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC162PA2VCL2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 LINC02447-202ENST00000501888 2146 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 AC069224.1-201ENST00000566372 1715 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 SPCS2P4-201ENST00000436160 681 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 ACTG1P14-201ENST00000446382 1122 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 RN7SL589P-201ENST00000481268 310 ntBASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC162PA2VCL2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms