Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 BX005266.1-201ENST00000473402 457 ntBASIC17.68■□□□□ 0.42
CCDC66A2RUB6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.68■□□□□ 0.42
CCDC66A2RUB6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.68■□□□□ 0.42
CCDC66A2RUB6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.68■□□□□ 0.42
CCDC66A2RUB6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AL139288.1-201ENST00000623748 933 ntBASIC17.67■□□□□ 0.42
CCDC66A2RUB6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC126335.2-201ENST00000623362 4637 ntBASIC17.67■□□□□ 0.42
CCDC66A2RUB6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC66A2RUB6 AC005252.3-201ENST00000623855 2258 ntBASIC17.67■□□□□ 0.42
CCDC66A2RUB6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms