Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 LINC01144-201ENST00000626198 1710 ntBASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC007326.2-201ENST00000624224 7579 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC006058.4-201ENST00000624016 1670 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC140658.5-201ENST00000438532 169 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 KRT18P2-201ENST00000447938 1258 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 PDPK2P-202ENST00000562415 1191 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AL009183.1-201ENST00000603760 355 ntBASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-DRB4X5D2U9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 ALOX12P2-203ENST00000570921 1945 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 PAUPAR-201ENST00000630360 2965 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms