Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AL603832.2-201ENST00000566195 2125 ntBASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 FAM58CP-201ENST00000435741 640 ntBASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 SLC25A6P2-201ENST00000497974 877 ntBASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 SNHG9-202ENST00000564014 471 ntBASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 NORAD-201ENST00000565493 5339 ntBASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DDX49Q9Y6V7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX49Q9Y6V7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 ACTG1P4-201ENST00000425123 1122 ntBASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 CNN2P11-201ENST00000429351 262 ntBASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX49Q9Y6V7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 HLA-J-202ENST00000469281 1241 ntBASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ACTL9-202ENST00000612068 1252 ntBASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 AC091812.2-201ENST00000619081 385 ntBASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX49Q9Y6V7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms