Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 AL031284.1-201ENST00000419297 478 ntBASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 AC009078.2-202ENST00000463353 338 ntBASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 MIR1199-201ENST00000621445 119 ntBASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HCC1Q9Y3T6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 CICP14-201ENST00000629111 2732 ntBASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HCC1Q9Y3T6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.71■□□□□ 0.58
R3HCC1Q9Y3T6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
R3HCC1Q9Y3T6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AC025062.2-201ENST00000605477 670 ntBASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AC107918.4-202ENST00000641623 219 ntBASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AC067930.6-201ENST00000623257 4947 ntBASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms