Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC00565-201ENST00000562710 2331 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SCARNA12-201ENST00000459155 270 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AHCYP3-201ENST00000420053 1279 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC092580.1-201ENST00000433998 658 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 KRT18P64-201ENST00000434946 1219 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 MIR4522-201ENST00000584932 87 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC107464.3-201ENST00000609172 737 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AL162426.1-201ENST00000624141 743 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 CYP4F24P-201ENST00000586049 1580 ntBASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC6.45□□□□□ -1.38
MACF1Q9UPN3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC090857.1-201ENST00000527400 390 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC093813.1-201ENST00000605066 256 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 DRD5P1-201ENST00000456605 1438 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 Z69890.1-201ENST00000382990 339 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC092638.2-201ENST00000441105 947 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC083801.1-201ENST00000491689 358 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AP005264.6-204ENST00000588436 719 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 AC090164.2-201ENST00000611487 516 ntBASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC6.44□□□□□ -1.38
MACF1Q9UPN3 RN7SL87P-201ENST00000497657 288 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms