Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 RN7SL204P-201ENST00000582831 262 ntBASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA1Q9UND3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AC018529.1-201ENST00000613063 361 ntBASIC15□□□□□ -0.01
NPIPA1Q9UND3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
NPIPA1Q9UND3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA1Q9UND3 AP3S2-216ENST00000617003 1561 ntBASIC14.99□□□□□ -0.01
NPIPA1Q9UND3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA1Q9UND3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA1Q9UND3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms