Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 YBX2P1-201ENST00000394192 760 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 TFAMP1-201ENST00000412727 736 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 MCCD1P2-201ENST00000423228 335 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 RN7SL589P-201ENST00000481268 310 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 AC092902.6-201ENST00000641783 218 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 CDC14C-201ENST00000428251 1719 ntBASIC13.46□□□□□ -0.25
CALYQ9NYX4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.46□□□□□ -0.25
CALYQ9NYX4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CALYQ9NYX4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CALYQ9NYX4 LINC02447-202ENST00000501888 2146 ntBASIC13.46□□□□□ -0.26
CALYQ9NYX4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
CALYQ9NYX4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 AC010491.1-201ENST00000563101 2797 ntBASIC13.46□□□□□ -0.26
CALYQ9NYX4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
CALYQ9NYX4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
CALYQ9NYX4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.26
CALYQ9NYX4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CALYQ9NYX4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 AC004832.2-201ENST00000426397 482 ntBASIC13.45□□□□□ -0.26
CALYQ9NYX4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 AC105233.2-201ENST00000523697 349 ntBASIC13.45□□□□□ -0.26
CALYQ9NYX4 AF228730.5-201ENST00000530288 346 ntBASIC13.45□□□□□ -0.26
CALYQ9NYX4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 AL138918.1-201ENST00000568306 659 ntBASIC13.45□□□□□ -0.26
CALYQ9NYX4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.45□□□□□ -0.26
CALYQ9NYX4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CALYQ9NYX4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CALYQ9NYX4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC069224.1-201ENST00000566372 1715 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms