Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 AC022210.1-201ENST00000449856 793 ntBASIC18.02■□□□□ 0.48
VTA1Q9NP79 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 BNIP3P1-202ENST00000550043 1585 ntBASIC18.02■□□□□ 0.48
VTA1Q9NP79 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 AL512343.1-201ENST00000605837 169 ntBASIC18.02■□□□□ 0.48
VTA1Q9NP79 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VTA1Q9NP79 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
VTA1Q9NP79 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 RPS2P32-201ENST00000439199 892 ntBASIC18.01■□□□□ 0.47
VTA1Q9NP79 TARDBPP1-201ENST00000442013 1203 ntBASIC18.01■□□□□ 0.47
VTA1Q9NP79 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 AC008735.3-201ENST00000596646 500 ntBASIC18.01■□□□□ 0.47
VTA1Q9NP79 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VTA1Q9NP79 REXO1L8P-201ENST00000604378 1897 ntBASIC18.01■□□□□ 0.47
VTA1Q9NP79 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VTA1Q9NP79 AC106820.2-201ENST00000563775 3264 ntBASIC18.01■□□□□ 0.47
VTA1Q9NP79 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18■□□□□ 0.47
VTA1Q9NP79 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18■□□□□ 0.47
VTA1Q9NP79 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18■□□□□ 0.47
VTA1Q9NP79 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 ZBTB45P2-201ENST00000452245 1531 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 AC009053.2-201ENST00000563701 2365 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18■□□□□ 0.47
VTA1Q9NP79 AC074338.1-201ENST00000416825 156 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 AL442647.2-201ENST00000429864 857 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18■□□□□ 0.47
VTA1Q9NP79 AC234783.1-201ENST00000441761 496 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18■□□□□ 0.47
VTA1Q9NP79 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms