Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 LINC02199-201ENST00000506655 2702 ntBASIC17.09■□□□□ 0.33
LHX5Q9H2C1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AL139400.1-201ENST00000366220 510 ntBASIC17.09■□□□□ 0.33
LHX5Q9H2C1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC023141.5-201ENST00000458585 616 ntBASIC17.09■□□□□ 0.33
LHX5Q9H2C1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC243562.2-201ENST00000561247 970 ntBASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX5Q9H2C1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 AC004987.2-201ENST00000395959 1148 ntBASIC17.08■□□□□ 0.32
LHX5Q9H2C1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 RBPMS2P1-201ENST00000437762 623 ntBASIC17.08■□□□□ 0.32
LHX5Q9H2C1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 AC018529.1-201ENST00000613063 361 ntBASIC17.08■□□□□ 0.32
LHX5Q9H2C1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LHX5Q9H2C1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 SPDYE14P-201ENST00000442619 822 ntBASIC17.07■□□□□ 0.32
LHX5Q9H2C1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 AL139010.1-201ENST00000454878 894 ntBASIC17.07■□□□□ 0.32
LHX5Q9H2C1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.07■□□□□ 0.32
LHX5Q9H2C1 AC026150.2-201ENST00000564693 1156 ntBASIC17.07■□□□□ 0.32
LHX5Q9H2C1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms