Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 HNRNPDP1-201ENST00000439535 754 ntBASIC14.88□□□□□ -0.03
SNX18Q96RF0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 IGHV3-65-201ENST00000523210 341 ntBASIC14.88□□□□□ -0.03
SNX18Q96RF0 OR7E14P-202ENST00000530490 1290 ntBASIC14.88□□□□□ -0.03
SNX18Q96RF0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 AL671883.3-201ENST00000603274 991 ntBASIC14.88□□□□□ -0.03
SNX18Q96RF0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 GPAA1P2-202ENST00000606848 1787 ntBASIC14.88□□□□□ -0.03
SNX18Q96RF0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX18Q96RF0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX18Q96RF0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 AL359258.3-201ENST00000622910 2331 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 MIR574-201ENST00000385209 96 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 MIR940-201ENST00000401276 94 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 RPS2P1-201ENST00000434010 821 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 AC020765.3-201ENST00000613051 740 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 MIR1199-201ENST00000621445 119 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 AC008735.5-201ENST00000623544 497 ntBASIC14.87□□□□□ -0.03
SNX18Q96RF0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms