Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 POU5F1P6-201ENST00000466990 990 ntBASIC15.41■□□□□ 0.06
COL21A1Q96P44 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 AC068137.2-201ENST00000605408 478 ntBASIC15.41■□□□□ 0.06
COL21A1Q96P44 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.41■□□□□ 0.06
COL21A1Q96P44 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL21A1Q96P44 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.41■□□□□ 0.06
COL21A1Q96P44 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 REXO1L8P-201ENST00000604378 1897 ntBASIC15.4■□□□□ 0.06
COL21A1Q96P44 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 AC004832.2-201ENST00000426397 482 ntBASIC15.4■□□□□ 0.06
COL21A1Q96P44 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL21A1Q96P44 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COL21A1Q96P44 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms