Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD1Q96JS3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC073439.1-201ENST00000624121 1774 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC023141.5-201ENST00000458585 616 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 IGHV3-62-201ENST00000520057 340 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC104640.1-201ENST00000562617 2109 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 AC069224.1-201ENST00000566372 1715 ntBASIC18.86■□□□□ 0.61
PGBD1Q96JS3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD1Q96JS3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 FOXO1B-201ENST00000504678 1527 ntBASIC18.85■□□□□ 0.61
PGBD1Q96JS3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms